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There are several matches for 'putative sigma factor'.
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6968 matches
showing page 1 of 349
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organism
protein
1)
Escherichia coli K12
flk -
Putative
flagella assembly protein; Acts as a regulator of flagellar gene expression by modulating the protein level of the anti
sigma
factor
FlgM upon sensing ring completion or hook elongation. Flk could inhibit FlgM secretion by acting as a braking system for the flagellar-associated type III secretion (T3S) system. Plays a role in hindering to flip the flagellar T3S specificity switch from the rod and hook-type substrates to filament-type substrates prior to hook-basal body (HBB) completion possibly by preventing interaction of FliK with FlhB (By similarity).
[a.k.a. AAC75381.1, b2321, rflH]
2)
Acetoanaerobium sticklandii
CBH21654.1 -
Putative
sigma
factor
; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
[a.k.a. CLOST_1534, cst:CLOST_1534, E3PS00,
Putative sigma factor
,
putative sigma factor
, ...]
3)
Agarivorans albus
AALB_0638 -
Putative
sigma
factor
; Belongs to the
sigma
-70
factor
family.
[a.k.a. GAD00558.1, NZ_BARX01000003.1,
Putative sigma factor
,
putative sigma factor
]
4)
Alkaliphilus metalliredigens
Amet_2405 - KEGG: cac:CAC0550 possible sigma factor.
[a.k.a. ABR48559.1, amt:Amet_2405, NC_009633.1,
Putative sigma factor
,
putative sigma factor
, ...]
5)
Alkaliphilus metalliredigens
Amet_2583 - KEGG: cac:CAC0550 possible sigma factor.
[a.k.a. ABR48735.1, NC_009633.1,
Putative sigma factor
,
putative sigma factor
]
6)
Aminobacter aminovorans
AMS42348.1 -
Putative
sigma
factor
; Pfam:pfam04542
Sigma
-70 region 2; Belongs to the
sigma
-70
factor
family.
[a.k.a. AA2016_3426, AMS42348,
Putative sigma factor
]
7)
Amycolatopsis methanolica
rpoE-24 -
Putative
sigma
factor
; Belongs to the
sigma
-70
factor
family.
[a.k.a. AIJ23825.1, AMETH_3733, RpoE,
Putative sigma factor
,
putative sigma factor
, ...]
8)
Azorhizobium caulinodans
pvdS -
Putative
sigma
factor
; Belongs to the
sigma
-70
factor
family. ECF subfamily.
[a.k.a. AZC_3242, BAF89240.1, azc:AZC_3242,
Putative sigma factor
,
putative sigma factor
, ...]
9)
Bacillus anthracis
GBAA_5493 -
Putative
sigma
factor
; Identified by match to protein family HMM PF04542; match to protein family HMM TIGR02937; Belongs to the
sigma
-70
factor
family.
[a.k.a. AAT34635.1, A0A2B0WIF9, DNA-directed RNA polymerase,
Putative sigma factor
,
putative sigma factor
, ...]
10)
Bacillus atrophaeus
AJF83976.1 - RNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.
[a.k.a. TD68_00360, A0A080UFA9_BACAT, RNA polymerase,
Putative sigma factor
]
11)
Bacteroides caccae
rpoE_1 -
Putative
sigma
factor
; Belongs to the
sigma
-70
factor
family. ECF subfamily.
[a.k.a. ERS852494_00034, CUO49907.1, CGC64_03475,
Putative sigma factor
,
putative sigma factor
, ...]
12)
Bacteroides caccae
CUP71265.1 -
Putative
sigma
factor
; Belongs to the
sigma
-70
factor
family. ECF subfamily.
[a.k.a. ERS852494_02920, ASM67743, ERS852558_00381,
Putative sigma factor
,
putative sigma factor
, ...]
13)
Bacteroides caccae
rpoE_11 -
Putative
sigma
factor
; Belongs to the
sigma
-70
factor
family. ECF subfamily.
[a.k.a. CUP73838.1, ERS852494_02944, CGC64_07585,
Putative sigma factor
,
putative sigma factor
, ...]
14)
Blastococcus saxobsidens
BLASA_4007 -
Putative
sigma
factor
; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology;
putative
factor
.
[a.k.a. CCG04835.1, bsd:BLASA_4007, CCG04835,
Putative sigma factor
,
putative sigma factor
, ...]
15)
Burkholderia pseudomallei
BPSL1130 -
Putative
sigma
factor
; Similar to Caulobacter crescentus
putative
RNA polymerase
sigma
factor
cc3266 SWALL:Q9A3D8 (EMBL:AE005990) (291 aa) fasta scores: E(): 9.8e-42, 44.84% id in 281 aa, and to Streptomyces coelicolor
putative
RNA polymerase
sigma
factor
sco1263 or 2scg18.10C SWALL:Q9K3H7 (EMBL:AL390188) (295 aa) fasta scores: E(): 1.5e-41, 45.93% id in 283 aa; Belongs to the
sigma
-70
factor
family.
[a.k.a. CAH35124.1, 3091502, Sigma factor,
Putative sigma factor
,
putative sigma factor
, ...]
16)
Burkholderia pseudomallei
BPSL1195 -
Putative
sigma
factor
; Similar to Ralstonia solanacearum probable RNA polymerase
sigma
factor
transcription regulator protein rsc2078 or rs03643 SWALL:Q8XXN5 (EMBL:AL646068) (188 aa) fasta scores: E(): 1.1e-51, 73.93% id in 188 aa, and to Xanthomonas axonopodis pv. citri str. 306 ECF
sigma
factor
xac0922 SWALL:AAM35810 (EMBL:AE011723) (221 aa) fasta scores: E(): 3.7e-08, 42.6% id in 169 aa, although shorter in its N-terminal region, and to Streptomyces coelicolor RNA polymerase
sigma
-E
factor
SigE or sco3356 or sce94.07 SWALL:RPOE_STRCO (SWALL:P38133) (176 aa) fasta scores: E(): 0.0035 [...]
[a.k.a. CAH35190.1, Q63VP9,
Putative sigma factor
,
putative sigma factor
]
17)
Burkholderia pseudomallei
BPSL1456 -
Putative
sigma
factor
; Similar to central parts of Escherichia coli, and Escherichia coli O157:H7 RNA polymerase
sigma
-E
factor
RpoE or SigE or b2573 or z3855 or ecs3439 SWALL:RPOE_ECOLI (SWALL:P34086) (191 aa) fasta scores: E(): 4.4e-10, 40.58% id in 138 aa, and of Ralstonia solanacearum probable RNA polymerase
sigma
factor
transcription regulator protein rsp1651 or rs02210 SWALL:Q8XPI9 (EMBL:AL646086) (208 aa) fasta scores: E(): 8.4e-34, 58.14% id in 172 aa. Note: this CDS is longer in its C-terminal region than most of its database matches; Belongs to the
sigma
-70
factor
family. ECF [...]
[a.k.a. CAH35458.1, IPR000838, CAH35458,
Putative sigma factor
,
putative sigma factor
, ...]
18)
Caldisalinibacter kiritimatiensis
EOC99404.1 -
Putative
sigma
factor
.
[a.k.a. L21TH_2585, EOC99404,
Putative sigma factor
,
putative sigma factor
]
19)
Catenulispora acidiphila
Caci_2095 - KEGG: fre:Franean1_3571
putative
sigma
factor
.
[a.k.a. ACU71014.1, NC_013131.1,
Putative sigma factor
,
putative sigma factor
]
20)
Clavibacter michiganensis sepedonicus
CMS0403 -
Putative
sigma
factor
; Belongs to the
sigma
-70
factor
family.
[a.k.a. CAQ00524.1, RNA polymerase sigma-B factor, B0RBX2,
Putative sigma factor
,
putative sigma factor
, ...]
6968 matches
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